Science & Math

Connect BridgeDb to any app

bridgedb webservices

No account neededbridgedb.org

What the catalog holds today. Ask for anything missing and your agent reads the API documentation and adds it.

Build solutions, not workarounds.

What do you want to automate with BridgeDb?

Ask the assistant

You'll sign in before anything runs. What you typed comes with you.

Connect your AI client

Give your AI client this address.

https://mcp.apiant.ai

Any client that takes a remote MCP server. Nothing to install. Create your free account, then sign in once in your browser.

Set it up in your client
Claude Code

Run this in the directory you want to work in.

claude mcp add --transport http -s project apiant-ai https://mcp.apiant.ai

Start Claude Code there, approve the server, and sign in in the browser page it opens.

Claude Code guide (opens in a new tab)
Claude, web and desktop

Open Customize, then Connectors, then Add custom connector, and paste the address. On Team and Enterprise an owner adds it first.

Setup guide (opens in a new tab)
Cursor

Add the address to your MCP configuration as a server URL. Cursor signs you in in your browser.

Setup guide (opens in a new tab)
Zed

Open Settings, then AI, then MCP Servers, then Add Server, then Add Remote Server.

Setup guide (opens in a new tab)
Codex and the ChatGPT desktop app

Open Settings, then MCP servers, then Add server, and choose Streamable HTTP. From the terminal, Codex takes the address with its own add command and then signs you in.

Setup guide (opens in a new tab)
Any other MCP client

Paste the address where the client asks for a remote MCP server URL, and name the server apiant-ai where it lets you. APIANT's skills reach the client over the same connection.

Setup guide (opens in a new tab)

Pair it

Connect BridgeDb with another app

What your agent can do with BridgeDb

Triggers and actions 6 actions

  • Action
    Batch find equivalent identifiers

    Map many identifiers at once (newline-delimited, optional per-line source system code and optional target system code) to their equivalents, for a given organism.

  • Action
    Find equivalent identifier in target database

    Map a source identifier to its equivalent identifier(s) in one specified target data source, for a given organism.

  • Action
    Find equivalent identifiers

    Map a source identifier to all equivalent identifiers across every other data source, for a given organism.

  • Action
    Find identifiers by name

    Free-text search for identifiers matching a query string within an organism, optionally capped to a result limit.

  • Action
    List data sources

    List the full BridgeDb data-source registry (system code, canonical name, identifier pattern, type) bundled with the deployment. Not organism-scoped.

  • Action
    List organisms

    List the organisms loaded in this BridgeDb deployment, which are the valid values for the {organism} path segment used by every other operation.

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Questions

BridgeDb, answered

What can your agent do in BridgeDb?

Any of BridgeDb's 6 actions, including Batch find equivalent identifiers, Find equivalent identifier in target database, Find equivalent identifiers and Find identifiers by name. Your agent maps the data both ways and tests every scenario before it ships.

Which apps can BridgeDb connect to?

Any app in the catalog; the list on this page pairs BridgeDb with each of them. If the other app is missing, point your agent at its API documentation and it builds the connector.

What happens when something fails?

Your agent works that out for you. It plans the failure paths along with the happy path, then tests every scenario before it ships.

Is there a free plan?

Yes. Every plan includes the agent, including free, and building from your own AI client spends no assistant credits.