Build solutions, not workarounds.
What do you want Pipefile and LAPIS to do together?
Ask the assistant
Connect your AI client
Give your AI client this address.
https://mcp.apiant.aiAny client that takes a remote MCP server. Nothing to install. Create your free account, then sign in once in your browser.
Set it up in your client
Claude Code
Run this in the directory you want to work in.
claude mcp add --transport http -s project apiant-ai https://mcp.apiant.aiStart Claude Code there, approve the server, and sign in in the browser page it opens.
Claude Code guide (opens in a new tab)Claude, web and desktop
Open Customize, then Connectors, then Add custom connector, and paste the address. On Team and Enterprise an owner adds it first.
Setup guide (opens in a new tab)Cursor
Add the address to your MCP configuration as a server URL. Cursor signs you in in your browser.
Setup guide (opens in a new tab)Zed
Open Settings, then AI, then MCP Servers, then Add Server, then Add Remote Server.
Setup guide (opens in a new tab)Codex and the ChatGPT desktop app
Open Settings, then MCP servers, then Add server, and choose Streamable HTTP. From the terminal, Codex takes the address with its own add command and then signs you in.
Setup guide (opens in a new tab)Any other MCP client
Paste the address where the client asks for a remote MCP server URL, and name the server apiant-ai where it lets you. APIANT's skills reach the client over the same connection.
Setup guide (opens in a new tab)Example flows
What Pipefile can start in LAPIS
When File Request Created in Pipefile
then Find amino acid insertions in LAPIS
When File Request Created in Pipefile
then Find amino acid mutations in LAPIS
Starting points drawn from the triggers and actions in the catalog today. Describe the flow you need, at any depth, and your agent builds it and tests every scenario before it ships.
Everything your agent can do with Pipefile and LAPIS
Triggers and actions 1 trigger · 23 actions
Trigger
File Request CreatedTriggers when a file request is created.
Action
Add File Request From TemplateCreate a new file request from an existing template for one recipient (name/email/phone), optionally on behalf of a team member via X-Pipefile-On-Behalf-Of.
Action
Create ContactAdd to contacts
Action
Delete ContactDelete a contact by id. Returns 204 No Content on success.
Action
Get ContactRetrieve one contact by id.
Action
Get File RequestRetrieve detailed information about one file request by id, including contents, items, files, and tracking events.
Action
List ContactsRetrieve a paginated list of contacts, filterable by name/email/phone partial match.
Action
List File Request TemplatesRetrieve the list of file request templates available for creating new file requests, with optional name search.
Action
Search File RequestsFinds all file requests matching this search query (contact name, email, tags, etc).
Action
Send RequestCreate and send a new request
Action
Update ContactUpdate name/email/phone of an existing contact by id.
Action
Find amino acid insertionsFind amino acid insertions occurring among samples matching filter criteria.
Action
Find amino acid mutationsFind amino acid mutations occurring among samples matching filter criteria.
Action
Find nucleotide insertionsFind nucleotide insertions occurring among samples matching filter criteria.
Action
Find nucleotide mutationsFind nucleotide mutations occurring among samples matching filter criteria.
Action
Find sample countsQuery aggregated SARS-CoV-2 sample statistics (counts) filtered by fields like date, location, or lineage.
Action
Find sample detailsRetrieve detailed per-sample metadata (collection date, location, lineage, host, etc.) matching filter criteria.
Action
Get aligned amino acid sequencesRetrieve aligned amino acid sequences (optionally for one gene) for samples matching filter criteria.
Action
Get aligned nucleotide sequencesRetrieve aligned nucleotide sequences for samples matching filter criteria.
Action
Get lineage definitionRetrieve the lineage tree/definition for a given lineage column.
Action
Get most recent common ancestorCompute the most recent common ancestor (in mutation/lineage terms) for samples matching filter criteria.
Action
Get phylogenetic subtreeRetrieve a phylogenetic subtree for samples matching filter criteria.
Action
Get reference genomeRetrieve the reference genome (nucleotide/gene sequence) used by this LAPIS instance.
Action
Get unaligned nucleotide sequencesRetrieve raw (unaligned) nucleotide sequences for samples matching filter criteria.
No trigger or action matches that. Ask your agent to add it: it reads the API documentation and builds what you describe.
Each app on its own
Reviews
What our customers say
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Questions
Pipefile and LAPIS, answered
What can start an automation from Pipefile?
Any of Pipefile's 1 trigger in the catalog, including File Request Created. Describe the moment in plain language and your agent picks the right one.
What can your agent do in LAPIS when something happens in Pipefile?
Any of LAPIS's 13 actions, including Find amino acid insertions, Find amino acid mutations, Find nucleotide insertions and Find nucleotide mutations. Your agent maps the data both ways and tests every scenario before it ships.
Can it also run from LAPIS to Pipefile?
LAPIS has no triggers in the catalog today, so automations start in Pipefile. If you need the other direction, ask: your agent reads LAPIS's API documentation and adds it.
Do I have to build a connector for Pipefile or LAPIS?
No. Both are in the catalog with their triggers and actions. You describe the automation; your agent builds it, tests every scenario and keeps it running.
What happens when something fails?
Your agent works that out for you. It plans the failure paths along with the happy path, then tests every scenario before it ships.
Is there a free plan?
Yes. Every plan includes the agent, including free, and building from your own AI client spends no assistant credits.