# Connect Fathom to LAPIS

When **New AI Summary** fires in [Fathom](https://apiant.ai/connections/fathom), your agent runs **Find amino acid insertions** in [LAPIS](https://apiant.ai/connections/lapis). Describe the whole flow and it is built, tested on every scenario and kept running.

Fathom **4** triggers Fathom **3** actions LAPIS **13** actions

What the catalog holds today. Ask for anything missing and your agent reads the API documentation and adds it.

## What do you want Fathom and LAPIS to do together?

Give your AI client this address.

`https://mcp.apiant.ai`

Any client that takes a remote MCP server. Nothing to install. Create your free account, then sign in once in your browser.

### Set it up in your client

### Claude Code

Run this in the directory you want to work in.

`claude mcp add --transport http -s project apiant-ai https://mcp.apiant.ai`

Start Claude Code there, approve the server, and sign in in the browser page it opens.

[Claude Code guide (opens in a new tab)](https://apiant.ai/docs/mcp/claude-code)

### Claude, web and desktop

Open Customize, then Connectors, then Add custom connector, and paste the address. On Team and Enterprise an owner adds it first.

[Setup guide (opens in a new tab)](https://apiant.ai/docs/mcp)

### Cursor

Add the address to your MCP configuration as a server URL. Cursor signs you in in your browser.

[Setup guide (opens in a new tab)](https://apiant.ai/docs/mcp)

### Zed

Open Settings, then AI, then MCP Servers, then Add Server, then Add Remote Server.

[Setup guide (opens in a new tab)](https://apiant.ai/docs/mcp)

### Codex and the ChatGPT desktop app

Open Settings, then MCP servers, then Add server, and choose Streamable HTTP. From the terminal, Codex takes the address with its own add command and then signs you in.

[Setup guide (opens in a new tab)](https://apiant.ai/docs/mcp)

### Any other MCP client

Paste the address where the client asks for a remote MCP server URL, and name the server apiant-ai where it lets you. APIANT's skills reach the client over the same connection.

[Setup guide (opens in a new tab)](https://apiant.ai/docs/mcp)

Example flows

## What Fathom can start in LAPIS

- When **New AI Summary** in Fathom then **Find amino acid insertions** in LAPIS
- When **New Highlight** in Fathom then **Find amino acid mutations** in LAPIS

Starting points drawn from the triggers and actions in the catalog today. Describe the flow you need, at any depth, and your agent builds it and tests every scenario before it ships.

Everything your agent can do with Fathom and LAPIS

## Triggers and actions 4 triggers · 16 actions

- Trigger

**New AI Summary**

Triggers instantly when a Fathom meeting's AI summary is ready.

- Trigger

**New Highlight**

Triggers when a new highlight is marked on a Fathom meeting.

- Trigger

**New Recording**

Triggers instantly when a new Fathom meeting recording is ready.

- Trigger

**New Transcript**

Triggers instantly when a Fathom meeting's transcript is ready.

- Action

**Get Meeting Summary**

Returns the AI summary of a recorded meeting.

- Action

**Get Meeting Transcript**

Returns the transcript of a recorded meeting, line by line with speaker and timestamp.

- Action

**List Meetings**

Returns your recorded Fathom meetings, optionally filtered by date, recorder, team, meeting type or invitee domain.

- Action

**Find amino acid insertions**

Find amino acid insertions occurring among samples matching filter criteria.

- Action

**Find amino acid mutations**

Find amino acid mutations occurring among samples matching filter criteria.

- Action

**Find nucleotide insertions**

Find nucleotide insertions occurring among samples matching filter criteria.

- Action

**Find nucleotide mutations**

Find nucleotide mutations occurring among samples matching filter criteria.

- Action

**Find sample counts**

Query aggregated SARS-CoV-2 sample statistics (counts) filtered by fields like date, location, or lineage.

- Action

**Find sample details**

Retrieve detailed per-sample metadata (collection date, location, lineage, host, etc.) matching filter criteria.

- Action

**Get aligned amino acid sequences**

Retrieve aligned amino acid sequences (optionally for one gene) for samples matching filter criteria.

- Action

**Get aligned nucleotide sequences**

Retrieve aligned nucleotide sequences for samples matching filter criteria.

- Action

**Get lineage definition**

Retrieve the lineage tree/definition for a given lineage column.

- Action

**Get most recent common ancestor**

Compute the most recent common ancestor (in mutation/lineage terms) for samples matching filter criteria.

- Action

**Get phylogenetic subtree**

Retrieve a phylogenetic subtree for samples matching filter criteria.

- Action

**Get reference genome**

Retrieve the reference genome (nucleotide/gene sequence) used by this LAPIS instance.

- Action

**Get unaligned nucleotide sequences**

Retrieve raw (unaligned) nucleotide sequences for samples matching filter criteria.

## Each app on its own

- [ **Fathom** Fathom combines an AI meeting assistant that improves the productivity of your team with a conversational...](https://apiant.ai/connections/fathom)
- [ **LAPIS** SARS-CoV-2 genomic sequences from public sources. Free, credential-less public API.](https://apiant.ai/connections/lapis)

Reviews

## What our customers say

## More from Fathom

- [ **Fathom to HubSpot** HubSpot is your all-in-one stop for all of your marketing software needs.](https://apiant.ai/connect/fathom-to-hubspot)
- [ **Fathom to Salesforce** Salesforce is a leading enterprise customer relationship management (CRM) platform.](https://apiant.ai/connect/fathom-to-salesforce)
- [ **Fathom to Slack** Slack is a messaging platform for teams. Post messages, manage channels, users, reminders, and react to...](https://apiant.ai/connect/fathom-to-slack)
- [ **Fathom to Google Sheets** Google Sheets](https://apiant.ai/connect/fathom-to-google-sheets)
- [ **Fathom to Gmail** Gmail is Google’s email service, featuring spam protection, search functions, and seamless integration with...](https://apiant.ai/connect/fathom-to-gmail)
- [ **Fathom to Google Calendar** Google Calendar is a time management tool providing scheduling features, event reminders, and integration...](https://apiant.ai/connect/fathom-to-google-calendar)

## More into LAPIS

- [ **HubSpot to LAPIS** HubSpot is your all-in-one stop for all of your marketing software needs.](https://apiant.ai/connect/hubspot-to-lapis)
- [ **Salesforce to LAPIS** Salesforce is a leading enterprise customer relationship management (CRM) platform.](https://apiant.ai/connect/salesforce-to-lapis)
- [ **Slack to LAPIS** Slack is a messaging platform for teams. Post messages, manage channels, users, reminders, and react to...](https://apiant.ai/connect/slack-to-lapis)
- [ **Google Sheets to LAPIS** Google Sheets](https://apiant.ai/connect/google-sheets-to-lapis)
- [ **Gmail to LAPIS** Gmail is Google’s email service, featuring spam protection, search functions, and seamless integration with...](https://apiant.ai/connect/gmail-to-lapis)
- [ **Google Calendar to LAPIS** Google Calendar is a time management tool providing scheduling features, event reminders, and integration...](https://apiant.ai/connect/google-calendar-to-lapis)

Questions

## Fathom and LAPIS, answered

###

### What can start an automation from Fathom?

Any of Fathom's 4 triggers in the catalog, including New AI Summary, New Highlight, New Recording and New Transcript. Describe the moment in plain language and your agent picks the right one.

###

### What can your agent do in LAPIS when something happens in Fathom?

Any of LAPIS's 13 actions, including Find amino acid insertions, Find amino acid mutations, Find nucleotide insertions and Find nucleotide mutations. Your agent maps the data both ways and tests every scenario before it ships.

###

### Can it also run from LAPIS to Fathom?

LAPIS has no triggers in the catalog today, so automations start in Fathom. If you need the other direction, ask: your agent reads LAPIS's API documentation and adds it.

###

### Do I have to build a connector for Fathom or LAPIS?

No. Both are in the catalog with their triggers and actions. You describe the automation; your agent builds it, tests every scenario and keeps it running.

###

### What happens when something fails?

Your agent works that out for you. It plans the failure paths along with the happy path, then tests every scenario before it ships.

###

### Is there a free plan?

Yes. Every plan includes the agent, including free, and building from your own AI client spends no assistant credits.
